Workflow: protein_extract
Fetched 2023-01-04 23:58:24 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
Requires:
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi-gpipe/pgap/c08fd46e8f715b9b5aa487466705863e4b1829df/GeneMarkS_Software_License.txt
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/1c16801a-91c6-4257-93bd-4a64289b0e6e
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/330582da-a368-44bb-8299-97034d31720a
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/c08fd46e8f715b9b5aa487466705863e4b1829df/progs/protein_extract.cwl
