Workflow: Run tRNAScan
Fetched 2023-01-11 22:33:15 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| taxid | Integer | ||
| seqids | File | ||
| taxon_db | File | ||
| asn_cache | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| Run_tRNAScan_dump |
gpx_qdump.cwl
(CommandLineTool)
|
Run tRNAScan, gather | |
| Run_tRNAScan_wnode |
trnascan_wnode.cwl
(CommandLineTool)
|
Run tRNAScan, execution | |
| Run_tRNAScan_submit |
gpx_qsubmit_trnascan.cwl
(CommandLineTool)
|
Run tRNAScan, scatter | |
| Run_tRNAScan_trnascan_dump |
trnascan_dump.cwl
(CommandLineTool)
|
Run tRNAScan, transform |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| annots | File |
Permalink:
https://w3id.org/cwl/view/git/aaafb033b3b96843142c8a481a135bfb9d0b28e9/bacterial_trna/wf_trnascan.cwl
