Workflow: protein_extract
Fetched 2023-01-12 00:55:12 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Requires:
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi-gpipe/pgap/062533f6b316c0eb75621371920f9e18aa2379b4/GeneMarkS_Software_License.txt
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/dc80059e-6c6b-402b-9196-c50a83586174
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/ba216003-066c-4d0b-9176-859f34c12067
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/062533f6b316c0eb75621371920f9e18aa2379b4/progs/protein_extract.cwl
