Workflow: gp_makeblastdb
Fetched 2026-10-16 06:53:44 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Requires:
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi-gpipe/pgap/062533f6b316c0eb75621371920f9e18aa2379b4/GeneMarkS_Software_License.txt
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| ids | File (Optional) | ||
| asnb | File (Optional) | ||
| asnt | File (Optional) | ||
| fasta | File (Optional) | ||
| title | String | ||
| dbtype | String | ||
| hardmask | File (Optional) | ||
| softmask | File (Optional) | ||
| asn_cache | Directory[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| mkdir |
gp_makeblastdb.cwl#mkdir/6df8e0de-fbb1-4c7f-8951-1b13cb89efdf
(CommandLineTool)
|
||
| actual |
gp_makeblastdb.cwl#actual/0db7bcc7-5570-489a-9515-a6c1e96e4f67
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| blastdb | Directory |
Permalink:
https://w3id.org/cwl/view/git/062533f6b316c0eb75621371920f9e18aa2379b4/progs/gp_makeblastdb.cwl
