Workflow: genomics-workspace-protein.cwl
Fetched 2023-01-04 17:05:48 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| tree | String[] | ||
| in_dummy | File | ||
| blastdb_Path | String[] | ||
| hmmerdb_Path | String[] | ||
| managePy_Path | String | ||
| scientific_name | String[] | ||
| in_fasta_protein | File[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| addblast |
addblast-protein.cwl
(CommandLineTool)
|
||
| addhmmer |
addhmmer-protein.cwl
(CommandLineTool)
|
||
| showblast |
showblast.cwl
(CommandLineTool)
|
||
| makeblastdb |
makeblastdb.cwl
(CommandLineTool)
|
||
| addfile_2_db |
addfile_2_db.cwl
(CommandLineTool)
|
||
| addfile_2_hmmer |
addfile_2_hmmer.cwl
(CommandLineTool)
|
||
| populatesequence |
populatesequence.cwl
(CommandLineTool)
|
Outputs
There are no outputs in this workflow
Permalink:
https://w3id.org/cwl/view/git/c6077d2756e628f469b446e1584ac8a86582d729/flow_genomicsWorkspace/genomics-workspace-protein.cwl
