final-workflow.cwl - Common Workflow Language Viewer

Workflow: final-workflow.cwl

Fetched 2023-01-09 12:52:57 GMT

Verified with cwltool version 3.1.20221201130942

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Inputs/Outputs

Unknown workflow license, check source repository.

Inputs

ID	Type	Title	Doc
PATH	String[]
tree	String[]
organization	String
managePy_Path	String
url_cds_fasta	String[]
deepPATH_bigwig	String[]
scientific_name	String[]
url_genomic_gff	String[]
url_md5checksums	String[]
deepPATH_analyses	String[]
url_genomic_fasta	String[]
url_protein_fasta	String[]
blastdb_Path_stage	String[]
gff_release_number	Integer
hmmerdb_Path_stage	String[]
link_to_publication	String
url_transcript_fasta	String[]
deepPATH_apollo2_data	String[]
deepPATH_genomic_fasta	String[]

Steps

ID	Runs	Label	Doc
dispatch	flow_dispatch/workflow.cwl (Workflow)
download	flow_download/workflow.cwl (Workflow)
gaps_or_not	gaps_or_not.cwl (Workflow)
md5checksums	flow_md5checksums/workflow.cwl (Workflow)
create_assembly_readme	flow_create_readme/readme-assembly-workflow.cwl (Workflow)
apollo2_data_processing	flow_apollo2_data_processing/processing/workflow.cwl (Workflow)
create_genePrediction_readme	flow_create_readme/readme-genePrediction-workflow.cwl (Workflow)

Outputs

There are no outputs in this workflow

Permalink: https://w3id.org/cwl/view/git/aa375dcaa5ccfbb4e2aa4433d10948c641b044eb/final-workflow.cwl