- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
bams | File[] | ||
genome | String | ||
clstats1 | 9bc2c9789bb3bbf0ad0cca47e610198b[] | ||
clstats2 | 87ae42e955e05bc91b326732b025e842[] | ||
fp_genotypes | File | ||
fp_intervals | File | ||
pairing_file | File | ||
request_file | File | ||
grouping_file | File | ||
bait_intervals | File | ||
project_prefix | String | ||
md_metrics_files | c17d418238fa88eb7189e7c5e7f3bfd0[] | ||
target_intervals | File |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
generate_pdf |
cmo-qcpdf/0.5.11/cmo-qcpdf.cwl
(CommandLineTool)
|
cmo-qcpdf |
None |
scatter_metrics |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
qc_files | File[] | ||
qual_pdf | File[] | ||
as_metrics | File[] | ||
gcbias_pdf | File[] | ||
hs_metrics | File[] | ||
insert_pdf | File[] | ||
qual_metrics | File[] | ||
doc_basecounts | File[] | ||
gcbias_metrics | File[] | ||
gcbias_summary | File[] | ||
insert_metrics | File[] | ||
per_target_coverage | File[] |
Permalink:
https://w3id.org/cwl/view/git/49d7810b6446d6aadfcdbb6b5deee9f02ad749c2/setup/cwl/module-5.cwl