Workflow: tmb_workflow.cwl

Fetched 2026-10-24 09:40:16 GMT

Workflow to run the TMB analysis on a batch of samples and merge the results back into a single data clinical file

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Inputs

ID Type Title Doc
pairs https://w3id.org/cwl/view/git/e19ef998e906eb915cf4351a3599abd9bff57205/cwl/types.yml#TMBInputPair[]
assay_coverage String

genome_coverage value; amount of the genome in bp covered by the assay

Steps

ID Runs Label Doc
run_tmb_workflow

Outputs

ID Type Label Doc
pairs https://w3id.org/cwl/view/git/e19ef998e906eb915cf4351a3599abd9bff57205/cwl/types.yml#TMBInputPair[]
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Permalink: https://w3id.org/cwl/view/git/e19ef998e906eb915cf4351a3599abd9bff57205/cwl/tmb_workflow.cwl