Workflow: rhapsody_targeted_1.8.cwl#SplitAndSubsample.cwl
Fetched 2023-01-04 20:02:36 GMT
Verified with cwltool version 3.1.20221201130942
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| Fastqs | File[] | ||
| SubsampleSeed | Integer | ||
| SubsampleRatio | Float | ||
| NumRecordsPerSplit | Long (Optional) | ||
| FilesToSkipSplitAndSubsample | String[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| FlattenOutput |
rhapsody_targeted_1.8.cwl#SplitAndSubsample.cwl/FlattenOutput/flatten_output
(ExpressionTool)
|
||
| SplitAndSubsample |
rhapsody_targeted_1.8.cwl#SplitAndSubsample.cwl/SplitAndSubsample/split_fastq
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| log | File[] | ||
| SplitAndSubsampledFastqs | File[] |
Permalink:
https://w3id.org/cwl/view/git/b9ec66d82bc04934fbe9f9088ae7e802d72c4a4e/v1.8/rhapsody_targeted_1.8.cwl?part=SplitAndSubsample.cwl
