Workflow: kfdrc_bwamem_subwf.cwl

Fetched 2019-07-23 15:53:18 GMT
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Inputs

ID Type Title Doc
base_name String
input_reads File
indexed_reference_fasta File

Steps

ID Runs Label Doc
bwa_input_prepare
../tools/bwa_input_prepare.cwl (CommandLineTool)
bwa_mem_split
../tools/bwa_mem_split.cwl (CommandLineTool)
expression_updatergsample
../tools/expression_preparerg.cwl (ExpressionTool)

Outputs

ID Type Label Doc
aligned_bams File[]
Permalink: https://w3id.org/cwl/view/git/dbaad281888ab5346892917c11ea3dd61ce2fbbd/workflows/dev/ultra-opt/workflows/kfdrc_bwamem_subwf.cwl