Workflow: SPRM pipeline

Fetched 2023-01-04 17:24:54 GMT
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Workflow as SVG
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Inputs

ID Type Title Doc
verbose Boolean (Optional) Whether to enable verbose/debug mode
mask_dir Directory Directory containing mask files
image_dir Directory Directory containing image files
options_file File (Optional) SPRM options file
enable_manhole Boolean (Optional) Whether to enable remote debugging via 'manhole'
enable_faulthandler Boolean (Optional) Whether to enable the Python 'faulthandler' module

Steps

ID Runs Label Doc
sprm
steps/sprm.cwl (CommandLineTool)
SPRM analysis

Outputs

ID Type Label Doc
sprm_output Directory SPRM output
Permalink: https://w3id.org/cwl/view/git/54442dda505509d7a779936946dc9b1971e07a4a/pipeline.cwl