Workflow: Genomes.cwl
Fetched 2023-01-11 21:50:37 GMT
Verified with cwltool version 3.1.20221201130942
This workflow describes the comparative genomics and genome assembly summary statistics
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| GFF_Files | File[] | ||
| Fasta_Files | File[] | ||
| Gene_Ontology | File | ||
| Taxonomy_database | File | ||
| Assembly_Stats_Files | File[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| process |
process.cwl
(CommandLineTool)
|
Query Processing | |
| cleaning |
clean.cwl
(CommandLineTool)
|
Data Cleaning | |
| data_gen |
data_gen.cwl
(CommandLineTool)
|
Data Generation | |
| schema_gen |
schema.cwl
(CommandLineTool)
|
Schema and Compiler Generator |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| Assembly_Stats | File | ||
| Comparative_Genomics_Stats | File |
Permalink:
https://w3id.org/cwl/view/git/8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb/boa/Genomes.cwl
