Workflow: bgzip and index VCF

Fetched 2019-03-19 15:41:50 GMT
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Workflow as SVG
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Inputs

ID Type Title Doc
vcf File

Steps

ID Runs Label Doc
bgzip
../detect_variants/bgzip.cwl (CommandLineTool)
bgzip VCF
index
../detect_variants/index_vcf.cwl (CommandLineTool)
vcf index

Outputs

ID Type Label Doc
indexed_vcf File
Permalink: https://w3id.org/cwl/view/git/d1ee6a2a323cee7e4af00c7e0b926c2192038e1d/varscan/bgzip_and_index.cwl