Workflow: Unaligned to aligned BAM

Fetched 2021-06-17 19:46:46 GMT
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Workflow as SVG
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  • Inputs/Outputs

Inputs

ID Type Title Doc
reference String
readgroup String
bam File

Steps

ID Runs Label Doc
align_and_tag
align_and_tag.cwl (CommandLineTool)
align with bwa_mem and tag

Outputs

ID Type Label Doc
tagged_bam File
Permalink: https://w3id.org/cwl/view/git/d1ee6a2a323cee7e4af00c7e0b926c2192038e1d/unaligned_bam_to_bqsr/align.cwl