Workflow: wf-variantcall.cwl

Fetched 2024-11-09 14:00:01 GMT
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Inputs

ID Type Title Doc
batch_rec https://w3id.org/cwl/view/git/595f6f0a59b937a862f79378fbb19ef1653dca90/wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl#batch_rec/batch_rec[]

Steps

ID Runs Label Doc
compare_to_rm
steps/compare_to_rm.cwl (CommandLineTool)
get_parallel_regions
steps/get_parallel_regions.cwl (CommandLineTool)
postprocess_variants
steps/postprocess_variants.cwl (CommandLineTool)
variantcall_batch_region
steps/variantcall_batch_region.cwl (CommandLineTool)
concat_batch_variantcalls
steps/concat_batch_variantcalls.cwl (CommandLineTool)

Outputs

ID Type Label Doc
vc_rec https://w3id.org/cwl/view/git/595f6f0a59b937a862f79378fbb19ef1653dca90/wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl#vc_rec/vc_rec[]
Permalink: https://w3id.org/cwl/view/git/595f6f0a59b937a862f79378fbb19ef1653dca90/wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl