Workflow: tiling_convert2fastj.cwl
Fetched 2023-01-12 16:19:32 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Requires:
This workflow is Open Source and may be reused according to the terms of:
GNU Affero General Public License v3.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| afn | File | ||
| l7g | File | ||
| ref | String | ||
| afnM | File | ||
| aidx | File | ||
| refM | String | ||
| aidxM | File | ||
| pasta | File | ||
| reffa | File | ||
| reffaM | File | ||
| seqidM | String | ||
| tagdir | File | ||
| refstream | File | ||
| bashscript | File | ||
| refdirectory | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| step1 |
getfilesgff.cwl
(ExpressionTool)
|
||
| step2 |
convertgff.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| out1 | b75db553b49275cdd45d39501394a88f[] | ||
| out2 | ca1de3b055b6bd0889e674acb51bf264[] |
Permalink:
https://w3id.org/cwl/view/git/604f393a8e1883bf7c275303f2777b368eb7fef8/cwl-version/convert2fastj/gff_version/cwl/tiling_convert2fastj.cwl
