- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
GNU Affero General Public License v3.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
afn | File | ||
l7g | File | ||
ref | String | ||
afnM | File | ||
aidx | File | ||
refM | String | ||
aidxM | File | ||
pasta | File | ||
reffa | File | ||
reffaM | File | ||
seqidM | String | ||
tagdir | File | ||
refstream | File | ||
bashscript | File | ||
refdirectory | Directory | ||
tile_assembly | File |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
step1 |
getdirs.cwl
(ExpressionTool)
|
||
step2 |
convertgvcf.cwl
(CommandLineTool)
|
Outputs
ID | Type | Label | Doc |
---|---|---|---|
out1 | Directory[] | ||
out2 | 47d71ed396b8c1c6a2e4767aa70eb62b[] |
Permalink:
https://w3id.org/cwl/view/git/4765da6828edaa70875c70584673cdaaead72c7b/cwl-version/convert2fastj/gvcf_version/cwl/tiling_convert2fastj_gvcf.cwl