Workflow: Resolve duplicate/overlapping calls in the gVCFs in a named list
Fetched 2023-01-12 09:41:58 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Requires:
This workflow is Open Source and may be reused according to the terms of:
GNU Affero General Public License v3.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| cleanvcf | File | ||
| bashscript | File | ||
| refdirectory | Directory | ||
| datafilenames | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| step1 |
getdirs_testset.cwl
(ExpressionTool)
|
||
| step2 |
cleangvcf.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| out1 | Directory[] |
Permalink:
https://w3id.org/cwl/view/git/2b35e13b565ee799a1c03db3237f459568822f66/cwl-version/clean/cwl/tiling_clean_gvcf_named.cwl
