Workflow: If Input file 1 has bz2 extension generate md5sum from input file 2 else returns input chksum json
Fetched 2021-01-13 09:58:24 GMT
Verified with cwltool version 1.0.20180525185854
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/cancerit/workflow-seq-import/4765cf6955bdce1320fdead7fe51be0e1b63c33d/LICENSE
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| in_1 | String | ||
| in_2 | File | ||
| in_json | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| chksum |
https://raw.githubusercontent.com/cancerit/dockstore-cgp-chksum/0.4.1/Dockstore.cwl
(CommandLineTool)
|
CGP file checksum generator |
 A Docker container for producing file md5sum and sha512sum. See the [dockstore-cgp-chksum](https://github.com/cancerit/dockstore-cgp-chksum) website for more information. |
| if_file_name_is_bz2_then_return_null_else_return_in_json_to_output |
if_file_name_is_bz2_then_return_null_else_return_in_json_to_output.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| chksum_json | File |
Permalink:
https://w3id.org/cwl/view/git/4765cf6955bdce1320fdead7fe51be0e1b63c33d/cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl
