Workflow: If Input file 1 has bz2 extension generate md5sum from input file 2 else returns input chksum json

Fetched 2022-08-09 19:04:13 GMT
children parents
Workflow as SVG
  • Selected
  • Default Values
  • Nested Workflows
  • Tools
  • Inputs/Outputs

Inputs

ID Type Title Doc
in_1 String
in_2 File
in_json File

Steps

ID Runs Label Doc
chksum
https://raw.githubusercontent.com/cancerit/dockstore-cgp-chksum/0.4.1/Dockstore.cwl (CommandLineTool)
CGP file checksum generator

![build_status](https://quay.io/repository/wtsicgp/dockstore-cgp-chksum/status) A Docker container for producing file md5sum and sha512sum. See the [dockstore-cgp-chksum](https://github.com/cancerit/dockstore-cgp-chksum) website for more information.

if_file_name_is_bz2_then_return_null_else_return_in_json_to_output
if_file_name_is_bz2_then_return_null_else_return_in_json_to_output.cwl (CommandLineTool)

Outputs

ID Type Label Doc
chksum_json File
Permalink: https://w3id.org/cwl/view/git/4765cf6955bdce1320fdead7fe51be0e1b63c33d/cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl