Workflow: wf-jointcall.cwl
Fetched 2023-01-12 11:02:32 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| jointvc_batch_rec | https://w3id.org/cwl/view/git/a297e87e014de998b8df9c90700c29173ec09932/giab-joint/giab-joint-workflow/wf-jointcall.cwl#jointvc_batch_rec/jointvc_batch_rec[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| run_jointvc |
steps/run_jointvc.cwl
(CommandLineTool)
|
||
| finalize_jointvc |
steps/finalize_jointvc.cwl
(CommandLineTool)
|
||
| postprocess_variants |
steps/postprocess_variants.cwl
(CommandLineTool)
|
||
| get_parallel_regions_jointvc |
steps/get_parallel_regions_jointvc.cwl
(CommandLineTool)
|
||
| concat_batch_variantcalls_jointvc |
steps/concat_batch_variantcalls_jointvc.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| jointvc_rec | https://w3id.org/cwl/view/git/a297e87e014de998b8df9c90700c29173ec09932/giab-joint/giab-joint-workflow/wf-jointcall.cwl#jointvc_rec/jointvc_rec[] | ||
| vrn_file_joint | File |
Permalink:
https://w3id.org/cwl/view/git/a297e87e014de998b8df9c90700c29173ec09932/giab-joint/giab-joint-workflow/wf-jointcall.cwl
