Workflow: zip_and_index_vcf.cwl
Fetched 2023-01-11 22:56:19 GMT
Verified with cwltool version 3.1.20221201130942
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| vcf | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| zip_step |
zip_and_index_vcf.cwl#zip_step/4d008784-58a0-43bf-84e6-bf2e2dc0a5c6
(CommandLineTool)
|
||
| index_step |
zip_and_index_vcf.cwl#index_step/b4231724-fced-4621-97f3-d4a3c0b24543
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| zipped_file | File | ||
| indexed_file | File |
Permalink:
https://w3id.org/cwl/view/git/88c5eef2f5ee5c1e878b0476f6e1f74cecf9ec29/zip_and_index_vcf.cwl
