- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
seqs | File |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
vizGraph |
tools/odgi/odgi_viz.cwl
(CommandLineTool)
|
odgi viz |
variation graph visualizations |
buildGraph |
tools/odgi/odgi-build-from-spoa-gfa.cwl
(CommandLineTool)
|
||
induceGraph |
tools/spoa/spoa.cwl
(CommandLineTool)
|
||
dedup_and_sort_by_quality_and_len |
tools/sort_fasta_by_quality_and_len/sort_fasta_by_quality_and_len.cwl
(CommandLineTool)
|
Outputs
ID | Type | Label | Doc |
---|---|---|---|
odgiPNG | File | ||
spoaGFA | File | ||
odgiGraph | File | ||
readsMergeDedupSortedByQualAndLen | File |
Permalink:
https://w3id.org/cwl/view/git/25a42bc03a51210bf57f2018692d3852b7fa1188/pangenome-generate_spoa.cwl