Workflow: wf.cwl#SplitAndSubsample.cwl
Fetched 2024-11-24 13:09:16 GMT
Verified with cwltool version 3.1.20230201224320
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| Fastqs | File[] | ||
| SubsampleSeed | Integer | ||
| SubsampleRatio | Float | ||
| NumRecordsPerSplit | Long (Optional) | ||
| FilesToSkipSplitAndSubsample | String[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| FlattenOutput |
wf.cwl#SplitAndSubsample.cwl/FlattenOutput/run/flatten_output
(ExpressionTool)
|
||
| SplitAndSubsample |
wf.cwl#SplitAndSubsample.cwl/SplitAndSubsample/run/split_fastq
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| log | File[] | ||
| SplitAndSubsampledFastqs | File[] |
Permalink:
https://w3id.org/cwl/view/git/c8d75785fd6accf3b47d1f9ee056675611e22e61/wf.cwl?part=SplitAndSubsample.cwl
