- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
cp | File | ||
jar | File | ||
bait | String | ||
name | String | ||
fasta | File | ||
mztab | File | ||
compiler | String | ||
fileType | String | ||
paramFile | File | ||
xml_output | String | ||
idxml_output | String | ||
IL_equivalent | Boolean | ||
proteinExport | String | ||
pia_proteins_R | File | ||
allow_unmatched | Boolean | ||
mztab_to_csv_py | File | ||
mztab_to_idxml_py | File | ||
enzyme_specificity | String | ||
missing_decoy_action | String |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
pia_run |
Tools/pia_run.cwl
(CommandLineTool)
|
||
pia_xml |
Tools/pia_xml.cwl
(CommandLineTool)
|
||
mztab_to_csv |
Tools/mztab_to_csv.cwl
(CommandLineTool)
|
||
pia_proteins |
Tools/pia_proteins.cwl
(CommandLineTool)
|
||
mztab_to_idxml |
Tools/mztab_to_idxml.cwl
(CommandLineTool)
|
||
peptide_indexer |
Tools/peptide_indexer.cwl
(CommandLineTool)
|
Outputs
ID | Type | Label | Doc |
---|---|---|---|
pia_proteins | File |
Permalink:
https://w3id.org/cwl/view/git/f165c14d6d2e20a5133fc42251ae565fcbe520f6/ProteinInferenceWorkflow.cwl