Workflow: Protein_Inference_workflow.cwl
Fetched 2025-08-16 22:06:50 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| cp | File | ||
| jar | File | ||
| bait | String | ||
| name | String | ||
| idxml | File | ||
| outfile | String | ||
| compiler | String | ||
| fileType | String | ||
| paramFile | File | ||
| proteinExport | String | ||
| pia_proteins_R | File | ||
| mztab_to_csv_py | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| pia_run |
Tools/pia_run.cwl
(CommandLineTool)
|
||
| pia_xml |
Tools/pia_xml.cwl
(CommandLineTool)
|
||
| mztab_to_csv |
Tools/mztab_to_csv.cwl
(CommandLineTool)
|
||
| pia_proteins |
Tools/pia_proteins.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| proteins_csv | File |
Permalink:
https://w3id.org/cwl/view/git/f19d21a59f6dbe6bfd7b73de4542ee3802182a00/Protein_Inference_workflow.cwl
