Workflow: rw-flow.cwl
Fetched 2024-04-25 08:33:11 GMT
Verified with cwltool version 3.1.20221201130942
run multiple rw stages sequentially using earlier step output as later stage input_bam
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
BSD 2-clause "Simplified" License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| threads | Integer (Optional) | ||
| reference | File (Optional) | ||
| rw1_output | String | ||
| rw2_output | String | ||
| rw1_input_bam | File[] | ||
| advanced_options |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| rw1 |
../algo/rw.cwl
(CommandLineTool)
|
||
| rw2 |
../algo/rw.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | File |
Permalink:
https://w3id.org/cwl/view/git/d20382adfe7285cb517a25d95d2bcb7586546e23/stage/rw-flow.cwl
