Workflow: unix_align_workflow.cwl

Fetched 2020-11-29 05:10:50 GMT
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Inputs

ID Type Title Doc
bam_path File

Steps

ID Runs Label Doc
merge
../../tools/unix/unix_merge_cmd.cwl (CommandLineTool)
bamtoreadgroup
../../tools/unix/unix_bamreadgroup_cmd.cwl (CommandLineTool)
align
../../tools/unix/unix_align_cmd.cwl (CommandLineTool)
bamtofastq
../../tools/unix/unix_bamtofastq_cmd.cwl (CommandLineTool)

Outputs

ID Type Label Doc
merged_bam File
Permalink: https://w3id.org/cwl/view/git/1046947f8d2923e6563b3aceac9e435554c5bea1/workflows/unix/unix_align_workflow.cwl