Workflow: fastq_clean_pe.cwl
Fetched 2023-01-12 01:07:37 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | https://w3id.org/cwl/view/git/ff015418f870bdfbd82ba675eb549fe8b4584b0c/tools/readgroup.yml#readgroup_fastq_pe_file |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| fastq_cleaner_pe |
../../tools/fastq_cleaner_pe.cwl
(CommandLineTool)
|
||
| emit_readgroup_fastq_pe_file |
../../tools/emit_readgroup_fastq_pe_file.cwl
(ExpressionTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| output | https://w3id.org/cwl/view/git/ff015418f870bdfbd82ba675eb549fe8b4584b0c/tools/readgroup.yml#readgroup_fastq_pe_file |
Permalink:
https://w3id.org/cwl/view/git/ff015418f870bdfbd82ba675eb549fe8b4584b0c/workflows/bamfastq_align/fastq_clean_pe.cwl
