Workflow: workflow.cwl
Fetched 2023-01-13 15:30:56 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| PATH | String[] | ||
| tree | String[] | ||
| in_seq | Directory | ||
| in_dummy | File | ||
| in_names | Directory | ||
| in_others | File[] | ||
| in_tracks | Directory | ||
| in_gc_bigwig | File | ||
| in_gaps_bigwig | File | ||
| in_genomic_gff | File | ||
| in_tracks_conf | File | ||
| deepPATH_bigwig | String[] | ||
| deepPATH_others | String[] | ||
| in_genomic_fasta | File | ||
| in_trackList_json | File | ||
| deepPATH_genomic_gff | String[] | ||
| deepPATH_apollo2_data | String[] | ||
| in_trackList_json_bak | File | ||
| deepPATH_genomic_fasta | String[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| cp_seq |
cp_dir.cwl
(CommandLineTool)
|
||
| cp_names |
cp_dir.cwl
(CommandLineTool)
|
||
| cp_others |
cp_file.cwl
(CommandLineTool)
|
||
| cp_tracks |
cp_dir.cwl
(CommandLineTool)
|
||
| cp_gc_bigwig |
cp_file.cwl
(CommandLineTool)
|
||
| cp_gaps_bigwig |
cp_file.cwl
(CommandLineTool)
|
||
| cp_genomic_gff |
cp_file.cwl
(CommandLineTool)
|
||
| cp_tracks_conf |
cp_file.cwl
(CommandLineTool)
|
||
| cp_genomic_fasta |
cp_file.cwl
(CommandLineTool)
|
||
| cp_trackList_json |
cp_file.cwl
(CommandLineTool)
|
||
| cp_trackList_json_bak |
cp_file.cwl
(CommandLineTool)
|
Outputs
There are no outputs in this workflow
Permalink:
https://w3id.org/cwl/view/git/a1533848372b4dd8237c45df91fe26b620113e38/flow_dispatch/2other_species/workflow.cwl
