Workflow: final-workflow.cwl

Fetched 2023-01-09 08:36:58 GMT
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Inputs

ID Type Title Doc
PATH String[]
tree String[]
organization String
managePy_Path String
url_cds_fasta String[]
path_cds_fasta File (Optional)
deepPATH_bigwig String[]
scientific_name String[]
url_genomic_gff String[]
path_genomic_gff File (Optional)
url_md5checksums String[] (Optional)
deepPATH_analyses String[]
url_genomic_fasta String[]
url_protein_fasta String[]
blastdb_Path_stage String[]
gff_release_number Integer
hmmerdb_Path_stage String[]
path_genomic_fasta File (Optional)
path_protein_fasta File (Optional)
link_to_publication String
url_transcript_fasta String[]
deepPATH_apollo2_data String[]
path_transcript_fasta File (Optional)
deepPATH_genomic_fasta String[]

Steps

ID Runs Label Doc
dispatch
download
gaps_or_not
gaps_or_not.cwl (Workflow)
md5checksums
create_assembly_readme
apollo2_data_processing
create_genePrediction_readme

Outputs

There are no outputs in this workflow

Permalink: https://w3id.org/cwl/view/git/677d79c721ad5f7a7e09b693d7f3fe2da70826e2/final-workflow.cwl