Workflow: genomics-workspace-protein.cwl
Fetched 2023-01-05 06:46:47 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| tree | String[] | ||
| in_dummy | File | ||
| blastdb_Path | String[] | ||
| hmmerdb_Path | String[] | ||
| managePy_Path | String | ||
| scientific_name | String[] | ||
| in_fasta_protein | File[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| addblast |
addblast-protein.cwl
(CommandLineTool)
|
||
| addhmmer |
addhmmer-protein.cwl
(CommandLineTool)
|
||
| showblast |
showblast.cwl
(CommandLineTool)
|
||
| makeblastdb |
makeblastdb.cwl
(CommandLineTool)
|
||
| addfile_2_db |
addfile_2_db.cwl
(CommandLineTool)
|
||
| addfile_2_hmmer |
addfile_2_hmmer.cwl
(CommandLineTool)
|
||
| populatesequence |
populatesequence.cwl
(CommandLineTool)
|
Outputs
There are no outputs in this workflow
Permalink:
https://w3id.org/cwl/view/git/58b23bf2d10154a5f2296df8fce496de4cecffef/flow_genomicsWorkspace/genomics-workspace-protein.cwl
