- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
in_table | File (Optional) | ||
url_string | String | ||
in_cds_fasta | File (Optional) | ||
url_cds_fasta | String[] | ||
in_genomic_gff | File (Optional) | ||
path_cds_fasta | File (Optional) | ||
url_table_file | String[] | ||
in_md5checksums | File (Optional) | ||
url_genomic_gff | String[] | ||
in_genomic_fasta | File (Optional) | ||
in_protein_fasta | File (Optional) | ||
path_genomic_gff | File (Optional) | ||
url_genomic_fasta | String[] | ||
url_protein_fasta | String[] | ||
path_genomic_fasta | File (Optional) | ||
path_protein_fasta | File (Optional) | ||
in_transcript_fasta | File (Optional) | ||
url_transcript_fasta | String[] | ||
path_transcript_fasta | File (Optional) |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
gunzip_table |
gunzip_single.cwl
(CommandLineTool)
|
||
gunzip_cds_fasta |
gunzip_single.cwl
(CommandLineTool)
|
||
check_md5checksums |
check_md5checksums.cwl
(CommandLineTool)
|
||
gunzip_genomic_gff |
gunzip_single.cwl
(CommandLineTool)
|
||
extract_md5checksums |
extract_md5checksums.cwl
(CommandLineTool)
|
||
gunzip_genomic_fasta |
gunzip_single.cwl
(CommandLineTool)
|
||
gunzip_protein_fasta |
gunzip_single.cwl
(CommandLineTool)
|
||
gunzip_transcript_fasta |
gunzip_single.cwl
(CommandLineTool)
|
Outputs
ID | Type | Label | Doc |
---|---|---|---|
OUT_check | File | ||
OUT_table | File | ||
OUT_extract | File | ||
OUT_cds_fasta | File | ||
OUT_genomic_gff | File | ||
OUT_genomic_fasta | File | ||
OUT_protein_fasta | File | ||
OUT_transcript_fasta | File |
Permalink:
https://w3id.org/cwl/view/git/0ecf492419ddaa015f14a163381948c53b3deea6/flow_md5checksums/workflow.cwl