Workflow: Create ePCR version for primers
Fetched 2025-08-30 05:55:15 GMT
Verified with cwltool version 3.1.20230201224320
prepare UNITE and SIVLA fasta database files and taxonomy tables using cutadapt
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| error | String (Optional) | ||
| euka_forward | String | ||
| euka_reverse | String | ||
| prok_forward | String | ||
| prok_reverse | String | ||
| euka_sequences | File [format] | ||
| prok_sequences | File [format] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| euk |
../Tools/cutadapt.tool.cwl
(CommandLineTool)
|
cutadapt |
none |
| prok |
../Tools/cutadapt.tool.cwl
(CommandLineTool)
|
cutadapt |
none |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| classified_euk | File | ||
| classified_prok | File |
Permalink:
https://w3id.org/cwl/view/git/107cdd243d21449459a2126ddc7a365da64a74c0/CWL/Workflows/create_primer.workflow.cwl
