Workflow: checkm-subwf.cwl
Fetched 2023-01-10 09:44:33 GMT
Verified with cwltool version 3.1.20221201130942
- Selected
- |
- Default Values
- Nested Workflows
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- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/EBI-Metagenomics/genomes-pipeline/30964ec81217dfd6c758b31d0b0b27ce6ac4c2df/LICENSE
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| genomes_folder | Directory |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| checkm |
../../tools/checkm/checkm.cwl
(CommandLineTool)
|
checkm | |
| checkm2csv |
../../tools/checkm/checkm2csv.cwl
(CommandLineTool)
|
checkm |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| checkm_csv | File |
Permalink:
https://w3id.org/cwl/view/git/30964ec81217dfd6c758b31d0b0b27ce6ac4c2df/workflows/sub-wf/checkm-subwf.cwl
