Workflow: qiime2 rarefaction visualization

Fetched 2021-01-17 08:38:33 GMT

Alpha rarefaction plotting from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

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Inputs

ID Type Title Doc
rooted_tree File
max_depth Integer
sample_metadata File
table File

Steps

ID Runs Label Doc
alpha_rarefaction
qiime2-step3-alpha-analysis.cwl#diversity-alpha-rarefaction.cwl (CommandLineTool)
qiime2: Generate interactive alpha rarefaction curves by computing rarefactions between a depth range.

Outputs

ID Type Label Doc
alpha_rarefaction_file File
Permalink: https://w3id.org/cwl/view/git/68c92437c854a200433ee684067f81f13de5d8eb/packed/qiime2-step3-alpha-analysis.cwl?part=qiime2-07-alpha-rarefaction.cwl