Workflow: qiime2 importing data

Fetched 2023-01-04 10:33:29 GMT

Obtaining and importing data from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

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Inputs

ID Type Title Doc
barcodes File
sequences File
sequences_artifact_type String
sequences_artifact_filename String

Steps

ID Runs Label Doc
make_import_directory
qiime2-step1-import-demux.cwl#EMPSingleEndSequences-directory.cwl (CommandLineTool)
qiime2: Creates a directory populated with specifically named files as required by qiime2 EMPSingleEndSequences
make_sequences_artifact
qiime2-step1-import-demux.cwl#tools-import.cwl (CommandLineTool)
qiime2: Import data to create a new QIIME 2 Artifact

Outputs

ID Type Label Doc
sequences_artifact File
Permalink: https://w3id.org/cwl/view/git/e2dc95d4f12210359360d814382e7201d836dfcf/packed/qiime2-step1-import-demux.cwl?part=qiime2-01-import-data.cwl