Workflow: Task1-Multi-contrast
Fetched 2025-10-16 18:17:34 GMT
Verified with cwltool version 3.1.20230201224320
For CMRxRecon validation
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| submissionId | Integer | Submission ID | |
| synapseConfig | File | filepath to .synapseConfig file | |
| submitterUploadSynId | String | Synapse Folder ID accessible by the submitter |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| score |
steps/score-task1.cwl
(CommandLineTool)
|
Score predictions file | |
| email_score |
steps/email_score.cwl
(CommandLineTool)
|
||
| upload_log_file |
steps/upload_log_file.cwl
(CommandLineTool)
|
Upload log file | |
| download_submission |
https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/get_submission.cwl
(CommandLineTool)
|
||
| annotate_submission_with_output |
https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/annotate_submission.cwl
(CommandLineTool)
|
||
| set_submitter_folder_permissions |
https://raw.githubusercontent.com/Sage-Bionetworks/ChallengeWorkflowTemplates/v3.1/cwl/set_permissions.cwl
(CommandLineTool)
|
Outputs
There are no outputs in this workflow
Permalink:
https://w3id.org/cwl/view/git/5b55ee7ba12f81d938a909d75d8c48e51361b4cf/workflow-task1.cwl
