Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph trim-chipseq-pe.cwl

ChIP-Seq basic analysis workflow for a paired-end experiment with Trim Galore.

https://github.com/datirium/workflows.git

Path: workflows/trim-chipseq-pe.cwl

Branch/Commit ID: cb5e5b8563be4977e9f2babc14fe084faa234847
workflow graph search.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/search.cwl

Branch/Commit ID: 49cd284a8fc7884de763573075d3e1d6a4c1ffdd

Packed ID: main
workflow graph Creates FASTA file from BED coordinates

This workflow creates FASTA file from BED coordinates

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/fasta-from-bed.cwl

Branch/Commit ID: 0207b0171ab142dfb85db9c39050c5b4be51dd9e
workflow graph mut2.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mut2.cwl

Branch/Commit ID: 8d8512061f2367c90aac67bcbf92af1061b4af59
workflow graph Replace legacy AML Trio Assay

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/aml_trio_cle.cwl

Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268
workflow graph gather AML trio outputs

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/aml_trio_cle_gathered.cwl

Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
workflow graph scatter-wf3_v1_0.cwl#main

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf3_v1_0.cwl

Branch/Commit ID: 0ad6983898f0d9001fe0f416f97c4d8b940e384a

Packed ID: main
workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: 25aa4788dd4efb1cc8ed6f609cb7803896e4d28d
workflow graph wgs alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/tumor_only_wgs.cwl

Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263
workflow graph step_valuefrom5_wf_with_id_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step_valuefrom5_wf_with_id_v1_2.cwl

Branch/Commit ID: 0ad6983898f0d9001fe0f416f97c4d8b940e384a