Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: 55b6ee46b0c9fb1c9949cd0888b388c6f11b73b1
workflow graph packed_no_main.cwl#collision

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/packed_no_main.cwl

Branch/Commit ID: f453cdce5956fe6581f5ccdcb8aacb8c4f29f6d4

Packed ID: collision
workflow graph cond-wf-004.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-004.cwl

Branch/Commit ID: b60a42e3cc417c5b75b88fd7c6681abcc7ff5b89
workflow graph wgs alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_wgs_gvcf.cwl

Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: 046e980d131ebaf71f76599a749e2294c40c9d0d
workflow graph 816_wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/816_wf.cwl

Branch/Commit ID: 8b0cacc5510eb3eed4e6d6db4bb844cc6114b1dc
workflow graph metabarcode (gene amplicon) analysis for fastq files

protein - qc, preprocess, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/metabarcode-fasta.workflow.cwl

Branch/Commit ID: 8698ae242c1f7addf0003663192bb43d7cd36d09
workflow graph pennant_wf.cwl

https://github.com/lanl/BEE.git

Path: beeflow/data/cwl/bee_workflows/pennant/pennant_wf.cwl

Branch/Commit ID: 97f395b15bca03a0588c881e64cb0793e180c20d
workflow graph Hello World

Puts a message into a file using echo

 https://github.com/common-workflow-language/cwlviewer.git

Path: src/test/resources/cwl/hello/hello.cwl

Branch/Commit ID: 3e3362e41bc30d845b4a464af88ee8079494aadf

Packed ID: main
workflow graph schemadef-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl

Branch/Commit ID: a0f7d43bbc706af2a844be93fc19b2e4e4da626c