Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph env-wf1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/env-wf1.cwl

Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: f90b39e1b05e9bb37079b09f337f7e7ba5027f99
workflow graph kmer_cache_store

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_store.cwl

Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1
workflow graph heatmap-prepare.cwl

Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.

https://github.com/Barski-lab/workflows.git

Path: subworkflows/heatmap-prepare.cwl

Branch/Commit ID: d93911fa135411fbab99513e4a672056b30490ce
workflow graph record-output-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/record-output-wf.cwl

Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3
workflow graph mutect parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/mutect.cwl

Branch/Commit ID: f90b39e1b05e9bb37079b09f337f7e7ba5027f99
workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b
workflow graph Detect DoCM variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c
workflow graph Align reference proteins plane complete workflow

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_protein_alignment.cwl

Branch/Commit ID: 6d04f5d65d1d4893706d9ae7e27341633333054f
workflow graph directory.cwl

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: 9cda157cb4380e9d30dec29f0452c56d0c10d064