Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gathered exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8 |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 681555881cbdf95a1f4c29f6dc272eb6ca8e4d60 |
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Whole genome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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module-1
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-1.cwl Branch/Commit ID: 302b220bd06c195e43715c19685cb9c04692a73a |
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samples_fillout_workflow.cwl
Workflow to run GetBaseCountsMultiSample fillout on a number of samples, each with their own bam and maf files |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/samples_fillout_workflow.cwl Branch/Commit ID: 45604eaeea15030c7302941c761464ce392abf74 |
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lalalal.cwl
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https://github.com/teoloup/cwltools.git
Path: lalalal.cwl Branch/Commit ID: ffff3e8d2310ff23766ce91ab04c7515518303b5 |
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assm_assm_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: 42df0c0f9a4e5697abadd9cb52440691fafc8f5d |
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cache_test_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 7c7615c44b80f8e76e659433f8c7875603ae0b25 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: e9c83739a93fa0b18f8dea2f98b632a9e32725c9 |
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secret_wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/secret_wf.cwl Branch/Commit ID: 18b8fdf7d425d8e7d8986e08904ef09492798cf6 |
