Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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fastqtosam_pe.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: 3ae43ed82a98144cfd50d3b5d65f47ce63cbec7c |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 3bd060365f24a480b04951a3a75da807d42f010f |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: f7ac3eff79128831c9f7a565d5b187882f39aa58 |
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md5sum_v12.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/md5sum_v12.cwl Branch/Commit ID: 1a01b0220aa6bbd76e81ceb19a892ac69d6047ec |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: be32f1363f9a9a9247d738e9593b207e9c5172c8 |
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pipeline-se-blacklist-removal.cwl
ATAC-seq pipeline - reads: SE - with blacklist removal |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-se-blacklist-removal.cwl Branch/Commit ID: 7696e7eb27a9251fba53ef4ccacc84cc8f8b0685 |
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alignment_bwa_mem_no_trim.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_no_trim.cwl Branch/Commit ID: 39ddc4b79dc93076787046f591225dc7ca3100ce |
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Whole genome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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conflict.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/conflict.cwl Branch/Commit ID: 2a922ab11b2f9c21ae4955c74563543b87717b93 Packed ID: main |
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mk_coverage_QC_from_bed.cwl
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https://github.com/YinanWang16/tso500-ctdna-post-processing.git
Path: cwl/workflows/mk_coverage_QC_from_bed.cwl Branch/Commit ID: 85be51526be704059284cdfa33dad099a106daca |
