Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Replace legacy AML Trio Assay
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 93656ed6582073e434eab168c610625a835dce37 |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/step-valuefrom2-wf.cwl Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3 |
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packed_no_main.cwl#collision
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/packed_no_main.cwl Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77 Packed ID: collision |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b |
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corrupt_model.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/corrupt_model.cwl Branch/Commit ID: 96f1caf46ca4859e7cb49919dcb13bf53abf4393 |
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extract_capture_kit_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_capture_kit_http.cwl Branch/Commit ID: b2f7a697e08220234062a9cf558ba169d255b4a4 |
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PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf |
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BuildCembaReferences.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/BuildCembaReferences.cwl Branch/Commit ID: e910788d1f62bf470cc71f19af0713b79893f4ee |
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scatter-workflow.cwl
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https://github.com/BiodataAnalysisGroup/intro-to-cwl-docker.git
Path: _includes/cwl/scatter-workflow.cwl Branch/Commit ID: a4da0982677c2038cbd680a1c5e305d87fe030eb |
