Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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rRNA_selection.cwl
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 71d9c83 |
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wf.cwl
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https://github.com/KevinSayers/NF_Hello.git
Path: wf.cwl Branch/Commit ID: master |
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Produce a list of residue-mapped structural domain instances from Pfam ids
Retrieve and process the PDB structures corresponding to the Pfam family ids resulting in a list of residue-mapped structural domain instances along with lost structural instances (requires Data/pdbmap downloaded from Pfam and uses SIFTS resource for UniProt to PDB residue Mapping) |
https://gitlab.inria.fr/capsid.public_codes/CroMaSt.git
Path: Tools/resmapping_pfam_instances_subwf.cwl Branch/Commit ID: main |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: preprocess_vcf.cwl Branch/Commit ID: develop |
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scatter-valuefrom-wf5.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/scatter-valuefrom-wf5.cwl Branch/Commit ID: master |
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main-autofraginfo.cwl
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https://github.com/kyusque/abmp_log_dump2pieda.git
Path: main-autofraginfo.cwl Branch/Commit ID: master |
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bulk scRNA-seq pipeline using Salmon
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: bulk-pipeline.cwl Branch/Commit ID: 1af8809 |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/scatter-valuefrom-wf6.cwl Branch/Commit ID: master |
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module-4
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-4.cwl Branch/Commit ID: dev |
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EMG pipeline v3.0 (single end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: master |
