Explore Workflows
View already parsed workflows here or click here to add your own
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EMG assembly for paired end Illumina
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Path: workflows/emg-assembly.cwl Branch/Commit ID: 3039744 |
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TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)
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Path: workflows/TransDecoder-v5-wf-2steps.cwl Branch/Commit ID: master |
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mutect2_calling.cwl
GATK4.1.2 Mutect2 workflow |
Path: subworkflows/mutect2_calling.cwl Branch/Commit ID: master |
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workflow.cwl
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Path: workflow.cwl Branch/Commit ID: master |
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Transcripts annotation workflow
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Path: workflows/TranscriptsAnnotation-wf.cwl Branch/Commit ID: master |
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04-quantification-se-stranded.cwl
RNA-seq 04 quantification |
Path: v1.0/RNA-seq_pipeline/04-quantification-se-stranded.cwl Branch/Commit ID: master |
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alignment_workflow_md5checker.cwl
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Path: aligner/topmed-cwl/workflow/alignment_workflow_md5checker.cwl Branch/Commit ID: 1.32.0 |
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ocrevaluation-performance-wf-pack.cwl#ocrevaluation-performance-wf.cwl
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Path: ochre/cwl/ocrevaluation-performance-wf-pack.cwl Branch/Commit ID: master Packed ID: ocrevaluation-performance-wf.cwl |
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revcomp.cwl
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Path: workflows/sanbi_cwltutorial/revcomp/revcomp.cwl Branch/Commit ID: master |
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trim-rnaseq-se.cwl
Runs RNA-Seq BioWardrobe basic analysis with single-end data file. |
Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: master |
