Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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per_cluster_workflow.cwl
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https://github.com/fstrozzi/scalability-reproducibility-chapter.git
Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: master |
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screen out taxa
Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files) |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/organism-screening.workflow.cwl Branch/Commit ID: master |
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bulk_analysis.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_analysis.cwl Branch/Commit ID: 3da5dd0 |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/echo-wf-default.cwl Branch/Commit ID: main |
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LSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/LSU-from-tablehits.cwl Branch/Commit ID: f914942 |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: test |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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kallisto-demo.cwl
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https://github.com/common-workflow-language/workflows.git
Path: workflows/kallisto-demo.cwl Branch/Commit ID: master |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: zip_and_index_vcf.cwl Branch/Commit ID: develop |
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scatter2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/scatter2.cwl Branch/Commit ID: efd59864c24d97e6d0d1d273025d3ef9003fa44d |
