Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wf.cwl#main
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https://github.com/damonge/md_share.git
Path: wf.cwl Branch/Commit ID: master Packed ID: main |
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wf-alignment.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: NA24385-sv/NA24385-sv-workflow/wf-alignment.cwl Branch/Commit ID: master |
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VIRTUS.PE.cwl
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https://github.com/yyoshiaki/VIRTUS.git
Path: workflow/VIRTUS.PE.cwl Branch/Commit ID: master |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: develop |
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record-in-secondaryFiles-missing-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/record-in-secondaryFiles-missing-wf.cwl Branch/Commit ID: master |
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revsort-single.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/Duke-GCB/calrissian.git
Path: input-data/revsort-single.cwl Branch/Commit ID: master |
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picard_markduplicates
Mark duplicates |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 1.0.5 |
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fail-unconnected.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/fail-unconnected.cwl Branch/Commit ID: master |
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consensus_maf.cwl
Workflow to merge a large number of maf files into a single consensus maf file for use with GetBaseCountsMultiSample |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/consensus_maf.cwl Branch/Commit ID: master |
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kallisto-demo.cwl
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https://github.com/alexbarrera/GGR-cwl.git
Path: workflows/workflows/kallisto-demo.cwl Branch/Commit ID: master |
