Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac |
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scatter-wf3_v1_2.cwl#main
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/scatter-wf3_v1_2.cwl Branch/Commit ID: 15c8467d6d3c31a95ccc682095cf34aad125ca8c Packed ID: main |
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step_valuefrom5_wf_with_id_v1_0.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/step_valuefrom5_wf_with_id_v1_0.cwl Branch/Commit ID: 141048ae4b78aa765782bb752be4a1550edc2eea |
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split-directions.cwl
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https://git.astron.nl/RD/VLBI-cwl.git
Path: workflows/split-directions.cwl Branch/Commit ID: a58fba4c1343bed66a5b47ea6a197b0385dfd39a |
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umi duplex alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/umi_duplex_alignment.cwl Branch/Commit ID: 5c4125344b1b9125ad04d7e768ecc99901570a7a |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: cd1ba3df3745fba4b635f05c67ebeaf3b8a9f4ec |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb |
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PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: 4b73bfeb967ee9f57a0410276f7c39e784f0846f |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5 |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
