Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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kmer_cache_store
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 85e33a80019f8a630cb59ec6663ada7deb83e453 |
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maf-processing-pair.cwl
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https://github.com/mskcc/argos-cwl.git
Path: modules/pair/maf-processing-pair.cwl Branch/Commit ID: eb1c641d3134e7e13bc1a15fe7d8de7937527aca |
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env-wf3.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 0f4324ed32fbe5c7e53600e10e3d2941db618035 |
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STAR-Alignment-PE-circRNA
This workflow aligns the fastq files using STAR for paired-end samples to be used in circRNA pipeline |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/star-alignment-circRNA.cwl Branch/Commit ID: b5a440939ac6022ee81aeeb0dd7daf3983228a61 |
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revsort-single-no-docker.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/Duke-GCB/calrissian.git
Path: input-data/revsort-single-no-docker.cwl Branch/Commit ID: 1a87a2e9172cda417304e7c8e424799fa19bc06f |
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Alignment without BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 6bfb64375e7ebb6eb40f463ede86d8deccdb9eff |
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record-output-wf_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/record-output-wf_v1_2.cwl Branch/Commit ID: 15c8467d6d3c31a95ccc682095cf34aad125ca8c |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: f6aeeae01ca1d821f2be1966f48f5257100f90e5 |
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kf_single_cell_10x_refinement.cwl
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https://github.com/kids-first/kf-dev-single-cell-rna.git
Path: workflows/kf_single_cell_10x_refinement.cwl Branch/Commit ID: 8c1d2315ad46fe0a30bf618e108e55b0263c7c6d |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19 |
