Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph QIIME2 Step 2 (DADA2 option)

QIIME2 DADA2, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom

https://github.com/bespin-workflows/16s-qiime2.git

Path: 16s-step2-dada2-paired.cwl

Branch/Commit ID: develop
workflow graph PerformanceSummaryGenome_v0_1_0.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/PerformanceSummaryGenome_v0_1_0.cwl

Branch/Commit ID: master
workflow graph Single-cell Multiome ATAC and RNA-Seq Analyze

Single-cell Multiome ATAC and RNA-Seq Analyze Runs filtering, normalization, scaling, integration (optionally) and clustering for a single or aggregated single-cell Multiome ATAC and RNA-Seq datasets.

 https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-multiome-analyze-wf.cwl

Branch/Commit ID: main
workflow graph nanopore_bcr_abl_umi_analysis.cwl

https://github.com/teoloup/nanopore_fusion.git

Path: nanopore_bcr_abl_umi_analysis.cwl

Branch/Commit ID: main
workflow graph simple_magicblast.cwl

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/simple_magicblast.cwl

Branch/Commit ID: master
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: caea457
workflow graph workflow.cwl

https://github.com/mr-c/scalability-reproducibility-chapter.git

Path: CWL/workflow.cwl

Branch/Commit ID: CWL
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 8515542
workflow graph wf_multiple_writers1.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/additional_test_cases/wf_multiple_writers1.cwl

Branch/Commit ID: master
workflow graph functional analysis prediction with InterProScan

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: c1f8b22