Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Workflow that executes the SBG L1 Workflow

https://github.com/unity-sds/sbg-workflows.git

Path: L1-to-L2-e2e.cwl

Branch/Commit ID: 1.1.1
workflow graph canine_vcfmerger2_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_vcfmerger2_module.cwl

Branch/Commit ID: master
workflow graph l1a_workflow.cwl

https://github.com/unity-sds/sounder-sips-application.git

Path: cwl/l1a_workflow.cwl

Branch/Commit ID: main
workflow graph workflow_select_shape.cwl

https://github.com/mr-c/cwltests.git

Path: cwl/workflow_select_shape.cwl

Branch/Commit ID: pack_test
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 3039744
workflow graph workflow_p.cwl

https://gitlab.ebrains.eu/sofiakar/yre-standardised-workflows.git

Path: Workflows/PSD_workflow_bucket_1/workflow_p.cwl

Branch/Commit ID: poster
workflow graph fasta2taxa-plot

Input is a fasta file with n>1 samples, with sample id as sequence identifier prefix, and a sample id file. The workflow calls open otus and assigns taxa using greengenes. The output are taxa plots.

https://github.com/MG-RAST/qiime-pipeline.git

Path: CWL/Workflows/qiime/cluster2plot.cwl

Branch/Commit ID: master
workflow graph hisat2-cufflinks_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/hisat2-cufflinks/paired_end/hisat2-cufflinks_wf_pe.cwl

Branch/Commit ID: master
workflow graph 03-map-se.cwl

ATAC-seq 03 mapping - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl

Branch/Commit ID: master
workflow graph functional analysis prediction with InterProScan

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: 2104dc3